Spike timing dependent plasticity matlab tutorial pdf

Frontiers training deep spiking convolutional neural. Nest provides many examples that help you getting started with your own simulation project. A hebbian learning rule natalia caporale and yang dan division of neurobiology, department of molecular and cell biology, and helen wills. A popular way to model stdp is to use the derivative of the postsynaptic potential or calcium concentration and correlate this with the nmda activation. Bioinspired programming of memory devices for implementing an inference engine. Another important snn feature is spike timing dependent plasticity stdp, which is a timing dependent specialization of hebbian learning 1,2,5,6. In addition, we investigated whether spike timingdependent plasticity stdp could enable a neuron to reach the theoretical optimal snr. Spike timing dependent plasticity stdp as a hebbian synaptic learning rule has been demonstrated in various neural circuits over a wide spectrum of species, from insects to humans. Spike timingdependent construction simulation matlab central. A number of studies have found that the temporal resolution of the neural code is on a millisecond time scale, indicating that precise spike timing is a significant element in neural coding. There are various subtypes of spike timing dependent plasticity stdp. Suppose neuron nklast outputted a spike at time t kand receives input spikes at times t jfrom neuron nj. Bayesian computation emerges in generic cortical microcircuits through spiketimingdependent plasticity bernhard nessler1, michael pfeiffer1,2, lars buesing1, wolfgang maass1 1institute for theoretical computer science, graz university of technology, graz, austria, 2institute of neuroinformatics, university of zu. Optimality model of unsupervised spiketiming dependent.

Spiketimingdependent plasticity learning of coincidence. Spike timingdependent plasticity stdp as a hebbian synaptic learning rule has been demonstrated in various neural circuits over a wide spectrum of species, from insects to humans. Spiketimingdependent plasticity stdp is a rule for changes in the. Spike timing dependent plasticity is a biologically inspired form of hebbian learning which considers the relative spike time of preand postsynaptic neurons for updating the synaptic efficacy. Theoretical analysis of learning with rewardmodulated spike. Simplified spiking neural network architecture and stdp learning algorithm applied to image classification. Stdp postulates that the strength of a synapse is dependent on the degree of temporal correlation in the spiking activity of the connected pre and postneuron.

Modeling the interplay between structural plasticity and spike timing dependent plasticity richard m george, 1, 2 peter u diehl, 1, 2 matthew cook, 1, 2 christian mayr, 1, 2 and giacomo indiveri 1, 2. Does anyone have a spiketiming dependent plasticity. Unsupervised learning of visual features through spike timing dependent plasticity timothe. Reinforcement learning through modulation of spike timing dependent synaptic plasticity raz. Spike timingdependent construction is an algorithm designed to. So again our concern is for three very important core concepts in the field of neuroscience. A neuromorphic vlsi design for spike timing and rate based. On spiketimingdependentplasticity, memristive devices, and. Jacopo bono1, claudia clopath1 abstract synaptic plasticity is thought to be the principal mechanism underlying learning in the brain. Chow1,2,3,4,5 1department of mathematics, 2center for the neural basis of cognition, 3center for neuroscience at university of pittsburgh, and. The function according which the synaptic efficacies are changed is based on the biological model by song s. A learning theory for rewardmodulated spiketimingdependent.

Unsupervised learning of digit recognition using spiketiming. In spike timing dependent plasticity stdp rules, the synaptic weight changes at the times of presynaptic and postsynaptic spikes only, as a function of the other synaptic variables. Reinforcement learning through modulation of spiketiming. Spike timing dependent plasticity stdp is one of several factors critical for synaptic plasticity induction. Therefore, standard stdp models have expressed the weight change as a function of pairs of presynaptic and postsynaptic spike. Cellular mechanisms underlying synaptic spike timing dependent plasticity 1034.

The triplet model the simple stdp model which depends on pairs of spikes prepost and postpre correctly predicts the weight change only for a restricted number of protocols. Reinforcement learning through modulation of spiketimingdependent synaptic plasticity razvan v. For example, a mere 10% increase in coupling is sufficient to drive. Modeling the interplay between structural plasticity and. Spike timingdependent plasticity during experience dependent plasticity.

Implementing spiketimingdependent plasticity on spinnaker. Spikerate neural networks spiketiming dependent plasticity. Spiketiming dependent plasticity and regime transitions in. Implementing spiketimingdependent plasticity on spinnaker neuromorphic hardware xin jin, alexander rast, francesco galluppi, sergio davies, and steve furber abstract this paper presents an ef cient approach for implementing spiketimingdependent plasticity stdp on the spinnaker neuromorphic hardware. Spike timing dependent plasticity stdp is a temporally asymmetric form of hebbian learning. Spiketiming dependent plasticity and regime transitions in random recurrent neural networks. Does anyone have a spiketiming dependent plasticity algorithm implemented in matlab using an eventdriven approach. Perezcarrasco, timothee masquelier2, teresa serranogotarredona 1 and bernabe linaresbarranco. In spike timing dependent plasticity stdp, the order and precise temporal interval between presynaptic and postsynaptic spikes determine the sign and magnitude of longterm potentiation ltp or depression ltd. Stdp is widely utilized in models of circuitlevel plasticity, development, and learning.

The network consists of cortical spiking neurons with axonal conduction delays and spike timing dependent plasticity stdp. This interpretation is made explicit in theoretical models in which the total plasticity produced by complex spike. Unsupervised learning of visual features through spike. We tried models of various sizes 100 and 400 neurons, and found that. Spiketimingdependent plasticity of inhibitory synapses. Spike timing dependent plasticity stdp is a biologically plausible unsupervised learning mechanism that selflearns synaptic weights based on the degree of temporal correlations between the pre and postsynaptic spike events. Optimal spiketiming dependent plasticity for precise action. Jacob vogelstein1, francesco tenore2, ralf philipp2, miriam s. Spike timingdependent plasticity stanford university. Spike timing dependent plasticity of inhibitory synapses in the entorhinal cortex julie s. A neuromorphic vlsi design for spike timing and rate based synaptic plasticity. We are interested in applying snns to ml and rl problems. Database of neuron, python and matlab codes, demos and tutorials.

Spiketimingdependent plasticity leads to gamma band. Gerstner 1 1 school of computer and communication sciences and brainmind institute. Chow1,2,3,4,5 1department of mathematics, 2center for the neural basis of cognition, 3center for neuroscience at university of pittsburgh, and 4department of neurobiology, university of pittsburgh, pittsburgh, pennsylvania. A triplet spike timing dependent plasticity model generalizes the bienenstockcoopermunro rule to higherorder spatiotemporal correlations julijana gjorgjievaa,1,2, claudia clopathb, juliette audetc, and jeanpascal p. Calcium time course as a signal for spike timingdependent plasticity jonathan e. When a neuron is presented successively with discrete volleys of input spikes stdp has been shown to learn. Unsupervised pretraining using spike timing dependent plasticity. Synaptic plasticity spike timing dependent plasticity stdp is popularly used to achieve unsupervised learning in networks of spiking neurons. Spike timing dependent plasticity stdp is a special form of plasticity where the timing of pre and postsynaptic events determine if the synapse undergoes ltp or ltd. As with other forms of synaptic plasticity, it is widely believed that it underlies learning and information storage in the brain, as well as the development and.

Spike timing dependent plasticity stdp is a temporally asymmetric form of hebbian learning induced by tight temporal correlations between the spikes of pre and postsynaptic neurons. Spike timing dependent plasticity stdp is a phenomenon in which the precise timing of spikes affects the sign and magnitude of changes in synaptic strength. Bioinspired digit recognition using spike timing dependent plasticity stdp and rewardmodulated stdp in deep convolutional networks milad mozafari 1, mohammad ganjtabesh. Jan 26, 2017 for more information, see masquelier t, thorpe sj 2007 unsupervised learning of visual features through spike timing dependent plasticity. The relative timing of single spikes generated in connected pairs of neurons can.

On spiketimingdependentplasticity, memristive devices, and building a selflearning visual cortex carlos zamarrenoramos 1, luis a. Convolutional spike timing dependent plasticity based feature. Towards a learningtheoretic analysis of spiketiming. Competitive hebbian learning through spiketimingdependent synaptic plasticity, nature neuroscience vol. A1 each presynaptic spike stepwise increases a presynaptic eligibility trace e pre that otherwise exponentially decays to 0 with time constant t pre eq. Spike timingdependent construction simulation file. This breaks from merely pronouncing and discussing. Spike timing dependent plasticity stdp has been studied extensively in slices but whether such pairings can induce plasticity in vivo is not known. Diehl, student member, ieee, matthew cook, member, ieee, abstractthe recent development of poweref. Goldberg2 and gert cauwenberghs2 1department of biomedical engineering 2department of electrical and computer engineering johns hopkins university, baltimore, md 21218. Jul 12, 2012 thus the field of spiketimingdependent plasticity or stdp was born, via the first key studies of henry markram markram and sakmann, 1995.

Among the various types of heterosynaptic plasticity, the heterosynaptic form of spike timing dependent plasticity stdp is capturing a lot of interest because recent works have shown that it is a critical factor in the synaptic organization and resulting dendritic computation hiratani and fukai, 2017. In the context of ml, we want to learn a setting of synapse weights which will generate. Spike timingdependent plasticity in the address domain. Although the role of temporal order was suggested in the original statement of hebbs rule, the time window requirement is not incorporated in the equations. Spike timing dependent plasticity know it all youtube. Bolyai university, institute for interdisciplinary experimental research, 400271 clujnapoca, romania. A hebbian learning rule natalia caporale and yang dan division of neurobiology.

Some models of spike timing dependent plasticity with linear interactions between pairs of spikes can also be simulated. The stdp process partially explains the activity dependent development of nervous systems, especially with regard. As with other forms of synaptic plasticity, it is widely believed that it underlies learning and information storage in the brain, as well as the development and refinement of neuronal circuits during brain. Spiking neural network model and stdp rules we first reimplemented the spiking neural network snn model for mnist handwritten digit classification from 1. Triplets of spikes in a model of spike timingdependent. Classical experiments on spike timingdependent plasticity stdp use a protocol based on pairs of presynaptic and postsynaptic spikes repeated at a given frequency to induce synaptic potentiation or depression. Unsupervised learning of visual features through spike timing. Frontiers a neuroinspired system for online learning. In addition to the learning rules already described, another form of hebbian synaptic plasticity that has received a great deal of attention over the past two decades depends on the temporal order of activity between pre and postsynaptic cells. In brian, an stdp rule can be specified by defining an stdp object, as in the following example. The fabricated saobased memristors are shown to exhibit excellent memristive properties such as a high switch offon ratio of. Dec 10, 2017 spike timing dependent plasticity stdp is a temporally asymmetric form of hebbian learning induced by tight temporal correlations between the spikes of pre and postsynaptic neurons. Pairing pre and postsynaptic spikes potentiated inhibitory inputs irrespective of precise temporal order within. Spike time dependent plasticity neural computation 20082009.

Calcium time course as a signal for spiketimingdependent plasticity jonathan e. Using a proposed learning scheme, we investigate the. Spike timingdependent plasticity of neural circuits. If potentiation is assumed to be governed by triplets of spikes prepostpost instead of pairs of spikes, a much broader. Inhibitory and excitatory spiketimingdependent plasticity. Simplified spiking neural network architecture and stdp learning algorithm. In addition, we explore plasticitys ability to alter a neurons spike timing relative to its inputs. The dependence of synaptic modification on the order of pre and postsynaptic spiking within a critical window of tens of milliseconds has profound functional implications. Florian center for cognitive and neural studies coneural. From synapse to perception yang dan and muming poo division of neurobiology, department of molecular and cell biology, and helen wills neuroscience institute, university of california, berkeley, california i.

Matlab is a commercial software produced by mathworks and. Unsupervised learning by spike timing dependent plasticity. Thus the field of spiketimingdependent plasticity or stdp was born, via the first key studies of henry markram markram and sakmann, 1995. Perfect associative learning with spiketimingdependent. Unsupervised online learning with multiple postsynaptic.

Spike timing dependent plasticity in the address domain r. Optimal localist and distributed coding of spatiotemporal spike. Dec 23, 2017 this video is about spike timing dependent plasticity. Stdp is often interpreted as the comprehensive learning rule for a synapse the first law of synaptic plasticity. The spiketiming dependence of plasticity sciencedirect. Spike timing dependent plasticity stdp is a biological process that adjusts the strength of connections between neurons in the brain. This package simulates a biophysical model of spike timing dependent plasticity stdp, which is a form of associative synaptic modification which depends on the respective timing of pre and postsynaptic spikes. Optimality model of unsupervised spiketiming dependent plasticity. Competitive hebbian learning through spike timing dependent synaptic plasticity, nature neuroscience vol. Cellular mechanisms underlying synaptic spike timingdependent plasticity 1034. The growing experimental evidence that spike timing may be important to explain neural computations has. Simulations were obtained with the software matlab and the model for. With stdp, a neuron embedded in a neuronal network can determine which neighboring neurons are worth listening to by potentiating those inputs that.

Spiking neuron models, hodgkinhuxley model, izhikevich model, nonlinearity, criticality, short and long term plasticity, spike timing dependent plasticity, internal representation, actionvalue. Simplified spiking neural network architecture and stdp. In this tutorial, were going to talk about spike timing dependent plasticity. When precise spike timing or highfrequency firingrate fluctuations are found to carry information, the neural code is often identified as a temporal code. It exhibits sleeplike oscillations, gamma 40 hz rhythms, conversion of firing rates to spike timings, and other interesting regimes. The synapse is capable of spiketiming dependent plasticity stdp, where. In spiketimingdependent plasticity stdp, the order and precise temporal interval between presynaptic and postsynaptic spikes determine the sign and magnitude of longterm potentiation ltp or depression ltd. Spike timing dependent construction is an algorithm designed to grow a spiking network from an initial population of neurons based on adaptation under hebbian spike timing dependent plasticity stdp. Thorpe 2, and timoth ee masquelier 1 department of computer science, school of mathematics, statistics, and computer science, university of tehran. Spiketiming dependent plasticity and regime transitions in random recurrent neural networks fr ed eric henry, emmanuel dauc e to cite this version. Unsupervised learning by spike timing dependent plasticity in. Pdf with stdp, a neuron embedded in a neuronal network can determine which.

Information in the nervous system may be carried by both the rate and timing of neuronal spikes. The proposed circuit captures important aspects of both timing and ratebased synaptic plasticity that is of great interest for researchers in. Ito, but if you are out of town an email to me is ok pdf or postscript. Calcium time course as a signal for spiketimingdependent. Stdp corresponds to the way connections between neurons change according to the spiking activity in the network, and we use stdp to stimulate outputs of the network shortly after feeding it with a pattern as input, thus. Unsupervised learning using spike timing dependent plasticity. Spiketimingdependent plasticity stdp is a biological process that adjusts the strength of connections between neurons in the brain. Welcome to the second of the three tutorials that i have for you about synaptic plasticity. Spike timing dependent plasticity during experience dependent plasticity. Here we examine spiketimingdependent plasticity stdp of inhibitory synapses onto layer 5 neurons in slices of mouse auditory cortex, together with concomitant stdp of excitatory synapses. Recent findings of spike timing dependent plasticity stdp have fueled the interest in the potentia. The proposed models are validated in matlab simulations and physical implementations on a.

Unlike most other systems, we do not use a teaching signal and do not present any class labels to the network. Spiketiming dependent plasticity, learning rules, fig. Unsupervised online learning by spike timing dependent plasticity stdp on the binary mnist handwritten datasets is implemented, and its recognition result is determined by measuring firing rate of post neurons. The process adjusts the connection strengths based on the relative timing of a particular neurons output and input action potentials or spikes. Training a spiking neural network to control a 4dof robotic arm based on spike timing dependent plasticity. Database of neuron, python and matlab codes, demos and. Abstract a neural network model based on spike timing dependent plasticity stdp learning rule, where afferent neurons will excite both the target neuron and interneurons that in turn project to the target neuron, is applied to the tasks of learning and and xor functions. Modeling spike timing dependent plasticity with a retrograde. Sep 30, 2009 we demonstrated that within one neural architecture early gamma band responses can be modulated both by bottomup factors and by basal learning mechanisms mediated via spike timing dependent plasticity.

We use stdp to modify weights of synapses connecting pairs or populations of neurons in snns. Unsupervised learning of digit recognition using spiketimingdependent plasticity peter u. In addition, we explore plasticity s ability to alter a neurons spike timing relative to its inputs. This new learning paradigm known as spike timing dependent plasticity stdp has rapidly gained tremendous interest, perhaps because of its combination of elegant simplicity, biological. Moreover, the sao layer can be grown at room temperature with precise thickness control by. Ltp is induced by each postsynaptic spike proportionally. Experimental studies have observed long term synaptic potentiation ltp when a presynaptic neuron fires shortly before a postsynaptic neuron, and long term depression ltd when the presynaptic neuron fires shortly after, a phenomenon known as spike timing dependant plasticity stdp.

1048 919 448 1066 155 288 961 826 986 1402 1014 236 434 1107 1306 1234 719 1128 1108 582 1482 191 1285 541 1261 257 493 1124 48 1467 1395 725